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Runtime error
Runtime error
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·
0c3c182
1
Parent(s):
8c44199
Update app.py
Browse files
app.py
CHANGED
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@@ -21,7 +21,7 @@ import gc
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import jax
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from numba import cuda
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print('GPU available',torch.cuda.is_available())
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print('__CUDA Device Name:',torch.cuda.get_device_name(0))
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print(os.getcwd())
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if "/home/user/app/alphafold" not in sys.path:
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sys.path.append("/home/user/app/alphafold")
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@@ -81,7 +81,7 @@ def predict_structure(prefix, feature_dict, model_runners, random_seed=0):
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f.write(protein.to_pdb(unrelaxed_protein))
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return plddts
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@ray.remote(num_gpus=
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def run_protgpt2(startsequence, length, repetitionPenalty, top_k_poolsize, max_seqs):
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print("running protgpt2")
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print(gpu_usage())
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@@ -103,7 +103,7 @@ def run_protgpt2(startsequence, length, repetitionPenalty, top_k_poolsize, max_s
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#print(gpu_usage())
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return sequences
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@ray.remote(num_gpus=
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def run_alphafold(startsequence):
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print(gpu_usage())
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model_runners = {}
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import jax
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from numba import cuda
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print('GPU available',torch.cuda.is_available())
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#print('__CUDA Device Name:',torch.cuda.get_device_name(0))
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print(os.getcwd())
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if "/home/user/app/alphafold" not in sys.path:
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sys.path.append("/home/user/app/alphafold")
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f.write(protein.to_pdb(unrelaxed_protein))
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return plddts
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@ray.remote(num_gpus=0, max_calls=1)
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def run_protgpt2(startsequence, length, repetitionPenalty, top_k_poolsize, max_seqs):
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print("running protgpt2")
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print(gpu_usage())
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#print(gpu_usage())
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return sequences
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@ray.remote(num_gpus=0, max_calls=1)
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def run_alphafold(startsequence):
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print(gpu_usage())
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model_runners = {}
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